SNP Detail For rs7216389
1.Mapping Information
Human SNP ID rs7216389
Human chromosome chr17
Human SNP position 39913696
Pig chromosome chr12
Pig SNP position 22883510
2.Annotation Information
PubMed ID17611496
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/17611496
StudyGenetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma.
Disease/TraitAsthma
Initial sample994 European ancestry cases, 1,243 European ancestry controls
Replication sample200 European ancestry cases, 2,120 European ancestry controls
Region17q21.1
Chromosome idchr17
Chromosome position39913696
Reported geneORMDL3
Mapped geneGSDMB
Upstream gene id
Downstream gene id
SNP gene ids55876
Upstream gene distance
Downstream gene distance
SNP risk allelers7216389-T
SNPsrs7216389
Merged0
SNP id current7216389
Contextintron_variant
Intergenic0
Allele frequency0.52
P value0.00000000009
Pvalue mlog10.0457574905606
P value text
Or beta1.45
%95 Ci[1.17-1.81]
PlatformIllumina [307328]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST000061