SNP Detail For rs7199390
1.Mapping Information
Human SNP ID rs7199390
Human chromosome chr16
Human SNP position 11219194
Pig chromosome chr3
Pig SNP position 32700213
2.Annotation Information
PubMed ID24564958
JournalMol Autism
Linkwww.ncbi.nlm.nih.gov/pubmed/24564958
StudyVariability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence.
Disease/TraitSocial communication problems
Initial sampleUp to 5,628 European ancestry individuals
Replication sampleNA
Region16p13.13
Chromosome idchr16
Chromosome position11219194
Reported geneC16orf75
Mapped geneCLEC16A - LOC105371082
Upstream gene id23274
Downstream gene id105371082
SNP gene ids
Upstream gene distance25916
Downstream gene distance29852
SNP risk allelers7199390-T
SNPsrs7199390
Merged0
SNP id current7199390
Contextintron_variant
Intergenic1
Allele frequency0.1
P value0.000002
Pvalue mlog5.69897000433601
P value text(Age 8)
Or beta0.19
%95 Ci[0.11-0.27] unit increase
PlatformIllumina [2293137] (imputed)
CNVN
Mapped traitsocial communication impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005427
Study accessionGCST002367