Human SNP ID | rs7199390 |
---|---|
Human chromosome | chr16 |
Human SNP position | 11219194 |
Pig chromosome | chr3 |
Pig SNP position | 32700213 |
PubMed ID | 24564958 |
---|---|
Journal | Mol Autism |
Link | www.ncbi.nlm.nih.gov/pubmed/24564958 |
Study | Variability in the common genetic architecture of social-communication spectrum phenotypes during childhood and adolescence. |
Disease/Trait | Social communication problems |
Initial sample | Up to 5,628 European ancestry individuals |
Replication sample | NA |
Region | 16p13.13 |
Chromosome id | chr16 |
Chromosome position | 11219194 |
Reported gene | C16orf75 |
Mapped gene | CLEC16A - LOC105371082 |
Upstream gene id | 23274 |
Downstream gene id | 105371082 |
SNP gene ids | |
Upstream gene distance | 25916 |
Downstream gene distance | 29852 |
SNP risk allele | rs7199390-T |
SNPs | rs7199390 |
Merged | 0 |
SNP id current | 7199390 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.1 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Age 8) |
Or beta | 0.19 |
%95 Ci | [0.11-0.27] unit increase |
Platform | Illumina [2293137] (imputed) |
CNV | N |
Mapped trait | social communication impairment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005427 |
Study accession | GCST002367 |