Human SNP ID | rs7178424 |
---|---|
Human chromosome | chr15 |
Human SNP position | 62088060 |
Pig chromosome | chr1 |
Pig SNP position | 121327771 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 15q22.2 |
Chromosome id | chr15 |
Chromosome position | 62088060 |
Reported gene | C2CD4A |
Mapped gene | NPM1P47 - C2CD4B |
Upstream gene id | 100129972 |
Downstream gene id | 388125 |
SNP gene ids | |
Upstream gene distance | 4661 |
Downstream gene distance | 75478 |
SNP risk allele | rs7178424-T |
SNPs | rs7178424 |
Merged | 0 |
SNP id current | 7178424 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.47 |
P value | 0.000000006 |
Pvalue mlog | 8.22184874961635 |
P value text | |
Or beta | 0.021 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |