SNP Detail For rs716595
1.Mapping Information
Human SNP ID rs716595
Human chromosome chr10
Human SNP position 110246728
Pig chromosome chr14
Pig SNP position 131573110
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitNormalized brain volume
Initial sample753 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region10q25.2
Chromosome idchr10
Chromosome position110246728
Reported geneMXI1
Mapped geneMXI1
Upstream gene id
Downstream gene id
SNP gene ids4601
Upstream gene distance
Downstream gene distance
SNP risk allelers716595-?
SNPsrs716595
Merged0
SNP id current716595
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000268