SNP Detail For rs7165042
1.Mapping Information
Human SNP ID rs7165042
Human chromosome chr15
Human SNP position 78830996
Pig chromosome chr7
Pig SNP position 53547862
2.Annotation Information
PubMed ID26343387
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26343387
StudyA comprehensive 1000 Genomes-based genome-wide association meta-analysis of coronary artery disease.
Disease/TraitMyocardial infarction
Initial sample27,509 European ancestry cases, 130 African American cases, 278 Hispanic American cases, 10,257 South Asian ancestry cases, 288 Lebanese ancestry cases, 1,687 East Asian ancestry cases, 99,121 European ancestry controls, 2,778 African American controls, 3
Replication sampleNA
Region15q25.1
Chromosome idchr15
Chromosome position78830996
Reported geneADAMTS7
Mapped geneADAMTS7 - TRK-CTT1-2
Upstream gene id11173
Downstream gene id100189013
SNP gene ids
Upstream gene distance19532
Downstream gene distance29566
SNP risk allelers7165042-C
SNPsrs7165042
Merged
SNP id current7165042
Contextintron_variant
Intergenic1
Allele frequency0.56
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.06
%95 Ci[1.04-1.09]
PlatformAffymetrix, Illumina [8600000] (imputed)
CNVN
Mapped traitmyocardial infarction
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000612
Study accessionGCST003117