Human SNP ID | rs7164883 |
---|---|
Human chromosome | chr15 |
Human SNP position | 73359833 |
Pig chromosome | chr7 |
Pig SNP position | 64642024 |
PubMed ID | 22544366 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22544366 |
Study | Meta-analysis identifies six new susceptibility loci for atrial fibrillation. |
Disease/Trait | Atrial fibrillation |
Initial sample | 6,707 European ancestry cases, 52,426 European ancestry controls |
Replication sample | 5,381 European ancestry casses, 10,030 European ancestry controls |
Region | 15q24.1 |
Chromosome id | chr15 |
Chromosome position | 73359833 |
Reported gene | HCN4 |
Mapped gene | HCN4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10021 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7164883-G |
SNPs | rs7164883 |
Merged | 0 |
SNP id current | 7164883 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.00000000000000003 |
Pvalue mlog | 16.5228787452803 |
P value text | |
Or beta | 1.19 |
%95 Ci | [1.14-1.24] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | atrial fibrillation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000275 |
Study accession | GCST001499 |