SNP Detail For rs7162542
1.Mapping Information
Human SNP ID rs7162542
Human chromosome chr15
Human SNP position 83845538
Pig chromosome chr7
Pig SNP position 56683271
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region15q25.2
Chromosome idchr15
Chromosome position83845538
Reported geneADAMTSL3
Mapped geneADAMTSL3
Upstream gene id
Downstream gene id
SNP gene ids57188
Upstream gene distance
Downstream gene distance
SNP risk allelers7162542-C
SNPsrs7162542
Merged0
SNP id current7162542
Contextintron_variant
Intergenic0
Allele frequency0.447
P value8E-55
Pvalue mlog54.096910013008
P value text
Or beta0.046
%95 Ci[0.04-0.052] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647