SNP Detail For rs7158782
1.Mapping Information
Human SNP ID rs7158782
Human chromosome chr14
Human SNP position 95702794
Pig chromosome chr7
Pig SNP position 124144505
2.Annotation Information
PubMed ID20876420
JournalJ Clin Oncol
Linkwww.ncbi.nlm.nih.gov/pubmed/20876420
StudyGenome-wide associations and functional genomic studies of musculoskeletal adverse events in women receiving aromatase inhibitors.
Disease/TraitAdverse response to aromatase inhibitors
Initial sample293 cases, 585 controls
Replication sampleNA
Region14q32.13
Chromosome idchr14
Chromosome position95702794
Reported geneTCL1A
Mapped geneTCL1B - TCL1A
Upstream gene id9623
Downstream gene id8115
SNP gene ids
Upstream gene distance10151
Downstream gene distance7173
SNP risk allelers7158782-?
SNPsrs7158782
Merged0
SNP id current7158782
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta2.13
%95 Ci[1.58-2.87]
PlatformIllumina [551395]
CNVN
Mapped traitresponse to aromatase inhibitor
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0061477
Study accessionGCST000813