Human SNP ID | rs7158782 |
---|---|
Human chromosome | chr14 |
Human SNP position | 95702794 |
Pig chromosome | chr7 |
Pig SNP position | 124144505 |
PubMed ID | 20876420 |
---|---|
Journal | J Clin Oncol |
Link | www.ncbi.nlm.nih.gov/pubmed/20876420 |
Study | Genome-wide associations and functional genomic studies of musculoskeletal adverse events in women receiving aromatase inhibitors. |
Disease/Trait | Adverse response to aromatase inhibitors |
Initial sample | 293 cases, 585 controls |
Replication sample | NA |
Region | 14q32.13 |
Chromosome id | chr14 |
Chromosome position | 95702794 |
Reported gene | TCL1A |
Mapped gene | TCL1B - TCL1A |
Upstream gene id | 9623 |
Downstream gene id | 8115 |
SNP gene ids | |
Upstream gene distance | 10151 |
Downstream gene distance | 7173 |
SNP risk allele | rs7158782-? |
SNPs | rs7158782 |
Merged | 0 |
SNP id current | 7158782 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.11 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 2.13 |
%95 Ci | [1.58-2.87] |
Platform | Illumina [551395] |
CNV | N |
Mapped trait | response to aromatase inhibitor |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0061477 |
Study accession | GCST000813 |