SNP Detail For rs7155434
1.Mapping Information
Human SNP ID rs7155434
Human chromosome chr14
Human SNP position 78308963
Pig chromosome chr7
Pig SNP position 107294311
2.Annotation Information
PubMed ID20197096
JournalNeuroimage
Linkwww.ncbi.nlm.nih.gov/pubmed/20197096
StudyGenome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer__s disease.
Disease/TraitBrain structure (temporal lobe volume)
Initial sample173 European ancestry Alzheimer__s disease cases, 361 European ancestry Mild Cognitive Impairment cases, 208 European ancestry controls
Replication sampleNA
Region14q24.3
Chromosome idchr14
Chromosome position78308963
Reported geneKIAA0743
Mapped geneNRXN3
Upstream gene id
Downstream gene id
SNP gene ids9369
Upstream gene distance
Downstream gene distance
SNP risk allelers7155434-A
SNPsrs7155434
Merged0
SNP id current7155434
Contextintron_variant
Intergenic0
Allele frequency0.27
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta3643
%95 Ci[NR] unit increase
PlatformIllumina [546314]
CNVN
Mapped traitAlzheimers disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249
Study accessionGCST000614