SNP Detail For rs715170
1.Mapping Information
Human SNP ID rs715170
Human chromosome chr18
Human SNP position 56128283
Pig chromosome chr1
Pig SNP position 116051962
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region18q21.2
Chromosome idchr18
Chromosome position56128283
Reported geneNR
Mapped geneLINC01539
Upstream gene id
Downstream gene id
SNP gene ids100505474
Upstream gene distance
Downstream gene distance
SNP risk allelers715170-C
SNPsrs715170
Merged
SNP id current715170
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000001
Pvalue mlog8
P value text
Or beta1.0752687
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048