SNP Detail For rs7141529
1.Mapping Information
Human SNP ID rs7141529
Human chromosome chr14
Human SNP position 68660027
Pig chromosome chr7
Pig SNP position 98666319
2.Annotation Information
PubMed ID23535732
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23535732
StudyIdentification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
Disease/TraitProstate cancer
Initial sample11,085 European ancestry cases, 11,463 European ancestry controls
Replication sample19,662 European ancestry cases, 19,715 European ancestry controls
Region14q24.1
Chromosome idchr14
Chromosome position68660027
Reported geneRAD51B, ZFP36L1, ACTN1
Mapped geneLOC105370544, LOC100996664, RAD51B
Upstream gene id
Downstream gene id
SNP gene ids105370544, 100996664, 5890
Upstream gene distance
Downstream gene distance
SNP risk allelers7141529-G
SNPsrs7141529
Merged0
SNP id current7141529
Contextintron_variant
Intergenic0
Allele frequency0.5
P value0.0000000003
Pvalue mlog9.52287874528033
P value text
Or beta1.09
%95 Ci[1.06-1.12]
PlatformIllumina [~ 2600000] (imputed)
CNVN
Mapped traitprostate carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001663
Study accessionGCST001942