Human SNP ID | rs713598 |
---|---|
Human chromosome | chr7 |
Human SNP position | 141973545 |
Pig chromosome | chr18 |
Pig SNP position | 8357660 |
PubMed ID | 20675712 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20675712 |
Study | The perception of quinine taste intensity is associated with common genetic variants in a bitter receptor cluster on chromosome 12. |
Disease/Trait | Bitter taste response |
Initial sample | 1,457 European ancestry individuals |
Replication sample | 73 European ancestry individuals |
Region | 7q34 |
Chromosome id | chr7 |
Chromosome position | 141973545 |
Reported gene | TAS2R38 |
Mapped gene | TAS2R38, OR9A4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5726, 130075 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs713598-? |
SNPs | rs713598 |
Merged | 0 |
SNP id current | 713598 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.4 |
P value | 2E-104 |
Pvalue mlog | 103.698970004336 |
P value text | (PROP) |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | sensory perception of bitter taste |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0050913 |
Study accession | GCST000746 |