SNP Detail For rs713598
1.Mapping Information
Human SNP ID rs713598
Human chromosome chr7
Human SNP position 141973545
Pig chromosome chr18
Pig SNP position 8357660
2.Annotation Information
PubMed ID20675712
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20675712
StudyThe perception of quinine taste intensity is associated with common genetic variants in a bitter receptor cluster on chromosome 12.
Disease/TraitBitter taste response
Initial sample1,457 European ancestry individuals
Replication sample73 European ancestry individuals
Region7q34
Chromosome idchr7
Chromosome position141973545
Reported geneTAS2R38
Mapped geneTAS2R38, OR9A4
Upstream gene id
Downstream gene id
SNP gene ids5726, 130075
Upstream gene distance
Downstream gene distance
SNP risk allelers713598-?
SNPsrs713598
Merged0
SNP id current713598
Contextmissense_variant
Intergenic0
Allele frequency0.4
P value2E-104
Pvalue mlog103.698970004336
P value text(PROP)
Or beta
%95 Ci
PlatformIllumina [~ 2300000] (imputed)
CNVN
Mapped traitsensory perception of bitter taste
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0050913
Study accessionGCST000746