Human SNP ID | rs7135659 |
---|---|
Human chromosome | chr12 |
Human SNP position | 114363967 |
Pig chromosome | chr14 |
Pig SNP position | 40250018 |
PubMed ID | 25035420 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25035420 |
Study | Identification of three novel genetic variations associated with electrocardiographic traits (QRS duration and PR interval) in East Asians. |
Disease/Trait | PR interval |
Initial sample | 6,085 Korean ancestry individuals |
Replication sample | 7,295 Japanese ancestry individuals |
Region | 12q24.21 |
Chromosome id | chr12 |
Chromosome position | 114363967 |
Reported gene | TBX5, TBX3 |
Mapped gene | TBX5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6910 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7135659-G |
SNPs | rs7135659 |
Merged | 0 |
SNP id current | 7135659 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.57 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 1.99 |
%95 Ci | [1.21-2.77] unit increase |
Platform | Affymetrix [2100000] (imputed) |
CNV | N |
Mapped trait | PR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004462 |
Study accession | GCST002535 |