Human SNP ID | rs7121446 |
---|---|
Human chromosome | chr11 |
Human SNP position | 122083949 |
Pig chromosome | chr9 |
Pig SNP position | 54319044 |
PubMed ID | 20838585 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20838585 |
Study | Longitudinal genome-wide association of cardiovascular disease risk factors in the Bogalusa heart study. |
Disease/Trait | Cardiovascular disease risk factors |
Initial sample | 525 European ancestry individuals |
Replication sample | 2,265 European ancestry individuals |
Region | 11q24.1 |
Chromosome id | chr11 |
Chromosome position | 122083949 |
Reported gene | SORL1, BLID |
Mapped gene | LOC105369537 - MIR100HG |
Upstream gene id | 105369537 |
Downstream gene id | 399959 |
SNP gene ids | |
Upstream gene distance | 13793 |
Downstream gene distance | 5154 |
SNP risk allele | rs7121446-G |
SNPs | rs7121446 |
Merged | 0 |
SNP id current | 7121446 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.78 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (waist circumference) |
Or beta | 0.15 |
%95 Ci | [0.09-0.21] % SD decrease, SNPxAGE interaction |
Platform | Illumina [545821] |
CNV | N |
Mapped trait | waist circumference |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004342 |
Study accession | GCST000789 |