SNP Detail For rs7121446
1.Mapping Information
Human SNP ID rs7121446
Human chromosome chr11
Human SNP position 122083949
Pig chromosome chr9
Pig SNP position 54319044
2.Annotation Information
PubMed ID20838585
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20838585
StudyLongitudinal genome-wide association of cardiovascular disease risk factors in the Bogalusa heart study.
Disease/TraitCardiovascular disease risk factors
Initial sample525 European ancestry individuals
Replication sample2,265 European ancestry individuals
Region11q24.1
Chromosome idchr11
Chromosome position122083949
Reported geneSORL1, BLID
Mapped geneLOC105369537 - MIR100HG
Upstream gene id105369537
Downstream gene id399959
SNP gene ids
Upstream gene distance13793
Downstream gene distance5154
SNP risk allelers7121446-G
SNPsrs7121446
Merged0
SNP id current7121446
Contextintron_variant
Intergenic1
Allele frequency0.78
P value0.000003
Pvalue mlog5.52287874528033
P value text(waist circumference)
Or beta0.15
%95 Ci[0.09-0.21] % SD decrease, SNPxAGE interaction
PlatformIllumina [545821]
CNVN
Mapped traitwaist circumference
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004342
Study accessionGCST000789