SNP Detail For rs7120820
1.Mapping Information
Human SNP ID rs7120820
Human chromosome chr11
Human SNP position 21372313
Pig chromosome chr2
Pig SNP position 41316531
2.Annotation Information
PubMed ID25551457
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25551457
StudyNo evidence for genome-wide interactions on plasma fibrinogen by smoking, alcohol consumption and body mass index: results from meta-analyses of 80,607 subjects.
Disease/TraitFibrinogen levels (smoking status, alcohol consumption or body mass index interaction)
Initial sampleup to 80,607 European ancestry individuals
Replication sampleNA
Region11p15.1
Chromosome idchr11
Chromosome position21372313
Reported geneNELL1
Mapped geneNELL1
Upstream gene id
Downstream gene id
SNP gene ids4745
Upstream gene distance
Downstream gene distance
SNP risk allelers7120820-T
SNPsrs7120820
Merged0
SNP id current7120820
Contextintron_variant
Intergenic0
Allele frequency0.376
P value0.000002
Pvalue mlog5.69897000433601
P value text(BMI)
Or beta0.004
%95 Ci[-0.01364-0.02164] g/L increase
PlatformAffymetrix, Illumina [~ 2600000] (imputed)
CNVN
Mapped traitfibrinogen measurement, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004623, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002734