Human SNP ID | rs7120820 |
---|---|
Human chromosome | chr11 |
Human SNP position | 21372313 |
Pig chromosome | chr2 |
Pig SNP position | 41316531 |
PubMed ID | 25551457 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25551457 |
Study | No evidence for genome-wide interactions on plasma fibrinogen by smoking, alcohol consumption and body mass index: results from meta-analyses of 80,607 subjects. |
Disease/Trait | Fibrinogen levels (smoking status, alcohol consumption or body mass index interaction) |
Initial sample | up to 80,607 European ancestry individuals |
Replication sample | NA |
Region | 11p15.1 |
Chromosome id | chr11 |
Chromosome position | 21372313 |
Reported gene | NELL1 |
Mapped gene | NELL1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4745 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7120820-T |
SNPs | rs7120820 |
Merged | 0 |
SNP id current | 7120820 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.376 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (BMI) |
Or beta | 0.004 |
%95 Ci | [-0.01364-0.02164] g/L increase |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | fibrinogen measurement, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004623, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002734 |