SNP Detail For rs7116456
1.Mapping Information
Human SNP ID rs7116456
Human chromosome chr11
Human SNP position 23933767
Pig chromosome chr2
Pig SNP position 38706528
2.Annotation Information
PubMed ID24376456
JournalFront Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24376456
StudyGene-alcohol interactions identify several novel blood pressure loci including a promising locus near SLC16A9.
Disease/TraitSystolic blood pressure (alcohol consumption interaction)
Initial sampleup to 6,882 European ancestry individuals
Replication sampleNA
Region11p14.3
Chromosome idchr11
Chromosome position23933767
Reported geneintergenic
Mapped geneLOC105376593 - LOC105376594
Upstream gene id105376593
Downstream gene id105376594
SNP gene ids
Upstream gene distance183849
Downstream gene distance325618
SNP risk allelers7116456-T
SNPsrs7116456
Merged0
SNP id current7116456
Contextintergenic_variant
Intergenic1
Allele frequency0.003
P value0.0000001
Pvalue mlog7
P value text(drinks/week)
Or beta0.929
%95 Ci[0.6-1.26] unit increase
PlatformAffymetrix [2500000] (imputed)
CNVN
Mapped traitsystolic blood pressure, alcohol drinking
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006335, http://www.ebi.ac.uk/efo/EFO_0004329
Study accessionGCST002307