Human SNP ID | rs7114000 |
---|---|
Human chromosome | chr11 |
Human SNP position | 126737685 |
Pig chromosome | chr9 |
Pig SNP position | 59691304 |
PubMed ID | 23667675 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23667675 |
Study | Genome wide association study of age at menarche in the Japanese population. |
Disease/Trait | Menarche (age at onset) |
Initial sample | 15,495 Japanese ancestry females |
Replication sample | NA |
Region | 11q24.2 |
Chromosome id | chr11 |
Chromosome position | 126737685 |
Reported gene | KIRREL3 |
Mapped gene | KIRREL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84623 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7114000-A |
SNPs | rs7114000 |
Merged | 0 |
SNP id current | 7114000 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.06837 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.1503 |
%95 Ci | [0.088-0.212] year increase |
Platform | Illumina [2310762] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002013 |