SNP Detail For rs7114000
1.Mapping Information
Human SNP ID rs7114000
Human chromosome chr11
Human SNP position 126737685
Pig chromosome chr9
Pig SNP position 59691304
2.Annotation Information
PubMed ID23667675
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23667675
StudyGenome wide association study of age at menarche in the Japanese population.
Disease/TraitMenarche (age at onset)
Initial sample15,495 Japanese ancestry females
Replication sampleNA
Region11q24.2
Chromosome idchr11
Chromosome position126737685
Reported geneKIRREL3
Mapped geneKIRREL3
Upstream gene id
Downstream gene id
SNP gene ids84623
Upstream gene distance
Downstream gene distance
SNP risk allelers7114000-A
SNPsrs7114000
Merged0
SNP id current7114000
Contextintron_variant
Intergenic0
Allele frequency0.06837
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.1503
%95 Ci[0.088-0.212] year increase
PlatformIllumina [2310762] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002013