SNP Detail For rs7112925
1.Mapping Information
Human SNP ID rs7112925
Human chromosome chr11
Human SNP position 67058689
Pig chromosome chr2
Pig SNP position 4416955
2.Annotation Information
PubMed ID20881960
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20881960
StudyHundreds of variants clustered in genomic loci and biological pathways affect human height.
Disease/TraitHeight
Initial sample133,653 European ancestry individuals
Replication sample50,074 European ancestry individuals
Region11q13.2
Chromosome idchr11
Chromosome position67058689
Reported geneRHOD
Mapped geneRHOD
Upstream gene id
Downstream gene id
SNP gene ids29984
Upstream gene distance
Downstream gene distance
SNP risk allelers7112925-T
SNPsrs7112925
Merged0
SNP id current7112925
Contextintron_variant
Intergenic0
Allele frequency0.35
P value0.0000000009
Pvalue mlog9.04575749056067
P value text
Or beta0.023
%95 Ci[NR] unit decrease
PlatformAffymetrix, Illumina [2834208] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000817
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region11q13.2
Chromosome idchr11
Chromosome position67058689
Reported geneRHOD
Mapped geneRHOD
Upstream gene id
Downstream gene id
SNP gene ids29984
Upstream gene distance
Downstream gene distance
SNP risk allelers7112925-T
SNPsrs7112925
Merged0
SNP id current7112925
Contextintron_variant
Intergenic0
Allele frequency0.356
P value0.000000000000006
Pvalue mlog14.2218487496163
P value text
Or beta0.024
%95 Ci[0.018-0.03] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647