Human SNP ID | rs7103004 |
---|---|
Human chromosome | chr11 |
Human SNP position | 103655296 |
Pig chromosome | chr9 |
Pig SNP position | 38159745 |
PubMed ID | 22993228 |
---|---|
Journal | Ann Rheum Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/22993228 |
Study | Novel genetic variants associated with lumbar disc degeneration in northern Europeans: a meta-analysis of 4600 subjects. |
Disease/Trait | Disc degeneration (lumbar) |
Initial sample | 4,683 European ancestry individuals |
Replication sample | NA |
Region | 11q22.3 |
Chromosome id | chr11 |
Chromosome position | 103655296 |
Reported gene | intergenic |
Mapped gene | LOC105369463 - LOC102723862 |
Upstream gene id | 105369463 |
Downstream gene id | 102723862 |
SNP gene ids | |
Upstream gene distance | 10745 |
Downstream gene distance | 183501 |
SNP risk allele | rs7103004-C |
SNPs | rs7103004 |
Merged | 0 |
SNP id current | 7103004 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.09 |
%95 Ci | [0.049-0.131] unit increase |
Platform | Affymetrix, Illumina [2552511] (imputed) |
CNV | N |
Mapped trait | lumbar disc degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004994 |
Study accession | GCST001687 |