SNP Detail For rs7101378
1.Mapping Information
Human SNP ID rs7101378
Human chromosome chr11
Human SNP position 109022640
Pig chromosome chr9
Pig SNP position 41730753
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region11q22.3
Chromosome idchr11
Chromosome position109022640
Reported geneNR
Mapped geneDDX10 - C11orf87
Upstream gene id1662
Downstream gene id399947
SNP gene ids
Upstream gene distance81710
Downstream gene distance399088
SNP risk allelers7101378-G
SNPsrs7101378
Merged0
SNP id current7101378
Contextintron_variant
Intergenic1
Allele frequency0.531881765256125
P value0.000007
Pvalue mlog5.15490195998574
P value text(IGP29)
Or beta0.1398
%95 Ci[0.079-0.201] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848