SNP Detail For rs7100689
1.Mapping Information
Human SNP ID rs7100689
Human chromosome chr10
Human SNP position 80462422
Pig chromosome chr14
Pig SNP position 88922083
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region10q23.1
Chromosome idchr10
Chromosome position80462422
Reported geneTSPAN14
Mapped geneTSPAN14
Upstream gene id
Downstream gene id
SNP gene ids81619
Upstream gene distance
Downstream gene distance
SNP risk allelers7100689-A
SNPsrs7100689
Merged0
SNP id current7100689
Contextintron_variant
Intergenic0
Allele frequency0.77
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.058
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262