SNP Detail For rs7090445
1.Mapping Information
Human SNP ID rs7090445
Human chromosome chr10
Human SNP position 61961417
Pig chromosome chr14
Pig SNP position 70467763
2.Annotation Information
PubMed ID23996088
JournalBlood
Linkwww.ncbi.nlm.nih.gov/pubmed/23996088
StudyVariation at 10p12.2 and 10p14 influences risk of childhood B-cell acute lymphoblastic leukemia and phenotype.
Disease/TraitAcute lymphoblastic leukemia (B-cell precursor)
Initial sample1,658 European ancestry child cases, 4,723 European ancestry controls
Replication sample1,449 European ancestry child cases, 1,488 European ancestry controls
Region10q21.2
Chromosome idchr10
Chromosome position61961417
Reported geneARID5B
Mapped geneARID5B
Upstream gene id
Downstream gene id
SNP gene ids84159
Upstream gene distance
Downstream gene distance
SNP risk allelers7090445-?
SNPsrs7090445
Merged0
SNP id current7090445
Contextintron_variant
Intergenic0
Allele frequencyNR
P value5E-54
Pvalue mlog53.3010299956639
P value text
Or beta
%95 Ci
PlatformIllumina [382776] (imputed)
CNVN
Mapped traitB-cell acute lymphoblastic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000094
Study accessionGCST002158