SNP Detail For rs708224
1.Mapping Information
Human SNP ID rs708224
Human chromosome chr12
Human SNP position 32283475
Pig chromosome chr5
Pig SNP position 45163584
2.Annotation Information
PubMed ID20686608
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/20686608
StudyGenome-wide association study of pancreatic cancer in Japanese population.
Disease/TraitPancreatic cancer
Initial sample991 Japanese ancestry cases, 5,209 Japanese ancestry controls
Replication sampleNA
Region12p11.21
Chromosome idchr12
Chromosome position32283475
Reported geneBICD1
Mapped geneBICD1
Upstream gene id
Downstream gene id
SNP gene ids636
Upstream gene distance
Downstream gene distance
SNP risk allelers708224-A
SNPsrs708224
Merged0
SNP id current708224
Contextintron_variant
Intergenic0
Allele frequency0.66
P value0.0000003
Pvalue mlog6.52287874528033
P value text(allelic)
Or beta1.32
%95 Ci[1.19-1.47]
PlatformIllumina [420236]
CNVN
Mapped traitpancreatic carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002618
Study accessionGCST000745