Human SNP ID | rs708224 |
---|---|
Human chromosome | chr12 |
Human SNP position | 32283475 |
Pig chromosome | chr5 |
Pig SNP position | 45163584 |
PubMed ID | 20686608 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/20686608 |
Study | Genome-wide association study of pancreatic cancer in Japanese population. |
Disease/Trait | Pancreatic cancer |
Initial sample | 991 Japanese ancestry cases, 5,209 Japanese ancestry controls |
Replication sample | NA |
Region | 12p11.21 |
Chromosome id | chr12 |
Chromosome position | 32283475 |
Reported gene | BICD1 |
Mapped gene | BICD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 636 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs708224-A |
SNPs | rs708224 |
Merged | 0 |
SNP id current | 708224 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.66 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (allelic) |
Or beta | 1.32 |
%95 Ci | [1.19-1.47] |
Platform | Illumina [420236] |
CNV | N |
Mapped trait | pancreatic carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002618 |
Study accession | GCST000745 |