Human SNP ID | rs7078439 |
---|---|
Human chromosome | chr10 |
Human SNP position | 126731415 |
Pig chromosome | chr14 |
Pig SNP position | 147713528 |
PubMed ID | 25517131 |
---|---|
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/25517131 |
Study | Novel Genes for Airway Wall Thickness Identified with Combined Genome Wide Association and Expression Analyses. |
Disease/Trait | Airway wall thickness |
Initial sample | 2,640 individuals |
Replication sample | up to 714 individuals |
Region | 10q26.2 |
Chromosome id | chr10 |
Chromosome position | 126731415 |
Reported gene | C10orf90, DOCK1 |
Mapped gene | C10orf90 - LOC105378550 |
Upstream gene id | 118611 |
Downstream gene id | 105378550 |
SNP gene ids | |
Upstream gene distance | 60377 |
Downstream gene distance | 172003 |
SNP risk allele | rs7078439-? |
SNPs | rs7078439 |
Merged | 0 |
SNP id current | 7078439 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.034 |
%95 Ci | [NR] unit increase |
Platform | Illumina [522636] |
CNV | N |
Mapped trait | airway wall thickness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006898 |
Study accession | GCST002794 |
PubMed ID | 25517131 |
Journal | Am J Respir Crit Care Med |
Link | www.ncbi.nlm.nih.gov/pubmed/25517131 |
Study | Novel Genes for Airway Wall Thickness Identified with Combined Genome Wide Association and Expression Analyses. |
Disease/Trait | Airway wall thickness |
Initial sample | 2,640 individuals |
Replication sample | up to 714 individuals |
Region | 10q26.2 |
Chromosome id | chr10 |
Chromosome position | 126731415 |
Reported gene | C10orf90, DOCK1 |
Mapped gene | C10orf90 - LOC105378550 |
Upstream gene id | 118611 |
Downstream gene id | 105378550 |
SNP gene ids | |
Upstream gene distance | 60377 |
Downstream gene distance | 172003 |
SNP risk allele | rs7078439-? |
SNPs | rs7078439 |
Merged | 0 |
SNP id current | 7078439 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000008 |
Pvalue mlog | 7.09691001300805 |
P value text | (FEV1/FVC < 80%) |
Or beta | 0.044 |
%95 Ci | [NR] unit increase |
Platform | Illumina [522636] |
CNV | N |
Mapped trait | airway wall thickness measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006898 |
Study accession | GCST002794 |