SNP Detail For rs7078012
1.Mapping Information
Human SNP ID rs7078012
Human chromosome chr10
Human SNP position 79945677
Pig chromosome chr14
Pig SNP position 88664413
2.Annotation Information
PubMed ID23144326
JournalAm J Respir Crit Care Med
Linkwww.ncbi.nlm.nih.gov/pubmed/23144326
StudyGenome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease.
Disease/TraitChronic obstructive pulmonary disease-related biomarkers
Initial sampleUp to 1,951 European ancestry smokers
Replication sampleNA
Region10q22.3
Chromosome idchr10
Chromosome position79945677
Reported geneSFTPD
Mapped geneSFTPD
Upstream gene id
Downstream gene id
SNP gene ids6441
Upstream gene distance
Downstream gene distance
SNP risk allelers7078012-T
SNPsrs7078012
Merged0
SNP id current7078012
Contextintron_variant
Intergenic0
Allele frequency0.13
P value0.000000005
Pvalue mlog8.30102999566398
P value text(SP-D)
Or beta
%95 Ci
PlatformIllumina [588352]
CNVN
Mapped traitchronic obstructive pulmonary disease, surfactant protein D measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0005081
Study accessionGCST001737