Human SNP ID | rs7076156 |
---|---|
Human chromosome | chr10 |
Human SNP position | 62655424 |
Pig chromosome | chr14 |
Pig SNP position | 71385024 |
PubMed ID | 22412388 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22412388 |
Study | A genome-wide scan of Ashkenazi Jewish Crohn__s disease suggests novel susceptibility loci. |
Disease/Trait | Crohn__s disease |
Initial sample | 737 Ashkenazi Jewish cases, 2,257 Ashkenazi Jewish controls |
Replication sample | 971 Ashkenazi Jewish cases, 2,124 Ashkenazi Jewish controls |
Region | 10q21.2 |
Chromosome id | chr10 |
Chromosome position | 62655424 |
Reported gene | ADO, ZNF365, ERG2 |
Mapped gene | ZNF365, LOC105378327 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 22891, 105378327 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7076156-G |
SNPs | rs7076156 |
Merged | 0 |
SNP id current | 7076156 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.751 |
P value | 0.000000007 |
Pvalue mlog | 8.15490195998574 |
P value text | |
Or beta | 1.19 |
%95 Ci | [1.10-1.30] |
Platform | Affymetrix, Illumina [1060934] (imputed) |
CNV | N |
Mapped trait | Crohn__s disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000384 |
Study accession | GCST001438 |