Human SNP ID | rs7072776 |
---|---|
Human chromosome | chr10 |
Human SNP position | 21744013 |
Pig chromosome | chr10 |
Pig SNP position | 58729839 |
PubMed ID | 23535729 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23535729 |
Study | Large-scale genotyping identifies 41 new loci associated with breast cancer risk. |
Disease/Trait | Breast cancer |
Initial sample | 10,052 European ancestry cases, 12,575 European ancestry controls |
Replication sample | 45,290 European ancestry cases, 41,880 European ancestry controls |
Region | 10p12.31 |
Chromosome id | chr10 |
Chromosome position | 21744013 |
Reported gene | DNAJC1, MLLT10 |
Mapped gene | MLLT10 - DNAJC1 |
Upstream gene id | 8028 |
Downstream gene id | 64215 |
SNP gene ids | |
Upstream gene distance | 380 |
Downstream gene distance | 12535 |
SNP risk allele | rs7072776-A |
SNPs | rs7072776 |
Merged | 0 |
SNP id current | 7072776 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.29 |
P value | 0.00000000000004 |
Pvalue mlog | 13.397940008672 |
P value text | |
Or beta | 1.07 |
%95 Ci | [1.05-1.09] |
Platform | Affymetrix, Illumina [~ 2600000] (imputed) |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001937 |