SNP Detail For rs7072776
1.Mapping Information
Human SNP ID rs7072776
Human chromosome chr10
Human SNP position 21744013
Pig chromosome chr10
Pig SNP position 58729839
2.Annotation Information
PubMed ID23535729
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23535729
StudyLarge-scale genotyping identifies 41 new loci associated with breast cancer risk.
Disease/TraitBreast cancer
Initial sample10,052 European ancestry cases, 12,575 European ancestry controls
Replication sample45,290 European ancestry cases, 41,880 European ancestry controls
Region10p12.31
Chromosome idchr10
Chromosome position21744013
Reported geneDNAJC1, MLLT10
Mapped geneMLLT10 - DNAJC1
Upstream gene id8028
Downstream gene id64215
SNP gene ids
Upstream gene distance380
Downstream gene distance12535
SNP risk allelers7072776-A
SNPsrs7072776
Merged0
SNP id current7072776
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.29
P value0.00000000000004
Pvalue mlog13.397940008672
P value text
Or beta1.07
%95 Ci[1.05-1.09]
PlatformAffymetrix, Illumina [~ 2600000] (imputed)
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST001937