SNP Detail For rs7071206
1.Mapping Information
Human SNP ID rs7071206
Human chromosome chr10
Human SNP position 77641558
Pig chromosome chr14
Pig SNP position 86644473
2.Annotation Information
PubMed ID22504420
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22504420
StudyGenome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture.
Disease/TraitBone mineral density
Initial sampleUp to 32,961 European and East Asian ancestry individuals
Replication sampleUp to 50,933 European and East Asian ancestry individuals
Region10q22.3
Chromosome idchr10
Chromosome position77641558
Reported geneKCNMA1
Mapped geneKCNMA1 - LOC105378372
Upstream gene id3778
Downstream gene id105378372
SNP gene ids
Upstream gene distance3739
Downstream gene distance60885
SNP risk allelers7071206-T
SNPsrs7071206
Merged0
SNP id current7071206
Contextupstream_gene_variant
Intergenic1
Allele frequency0.78
P value5E-19
Pvalue mlog18.3010299956639
P value text(LSBMD)
Or beta0.06
%95 Ci[NR] unit decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST001482