Human SNP ID | rs7065696 |
---|---|
Human chromosome | chrX |
Human SNP position | 53947621 |
Pig chromosome | chrX |
Pig SNP position | 52140673 |
PubMed ID | 21057379 |
---|---|
Journal | Psychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21057379 |
Study | Case-case genome-wide association analysis shows markers differentially associated with schizophrenia and bipolar disorder and implicates calcium channel genes. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 506 European ancestry bipolar 1 disorder cases, 523 European ancestry schizophrenia cases, 505 European ancestry controls |
Replication sample | NA |
Region | Xp11.22 |
Chromosome id | chrX |
Chromosome position | 53947621 |
Reported gene | PHF8 |
Mapped gene | PHF8 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23133 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7065696-? |
SNPs | rs7065696 |
Merged | 0 |
SNP id current | 7065696 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [302482] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000862 |