SNP Detail For rs705469
1.Mapping Information
Human SNP ID rs705469
Human chromosome chr10
Human SNP position 3616727
Pig chromosome chr10
Pig SNP position 73214435
2.Annotation Information
PubMed ID22864933
JournalCancer
Linkwww.ncbi.nlm.nih.gov/pubmed/22864933
StudyIdentification of novel germline polymorphisms governing capecitabine sensitivity.
Disease/TraitCapecitabine sensitivity
Initial sampleUp to 84 East Asian ancestry lymphoblastoid cell lines, up to 164 European ancestry lymphoblastoid cell lines, up to 173 African ancestry lymphoblastoid cell lines, up to 82 African American lymphoblastoid cell lines
Replication sampleNA
Region10p15.2
Chromosome idchr10
Chromosome position3616727
Reported geneintergenic
Mapped geneLOC105376501 - LOC105376360
Upstream gene id105376501
Downstream gene id105376360
SNP gene ids
Upstream gene distance59933
Downstream gene distance131778
SNP risk allelers705469-?
SNPsrs705469
Merged0
SNP id current705469
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformNR [~ 2000000]
CNVN
Mapped traitresponse to antineoplastic agent
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097327
Study accessionGCST001368