SNP Detail For rs705162
1.Mapping Information
Human SNP ID rs705162
Human chromosome chr10
Human SNP position 123492159
Pig chromosome chr14
Pig SNP position 144659391
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region10q26.13
Chromosome idchr10
Chromosome position123492159
Reported geneintergenic
Mapped geneLOC105378531
Upstream gene id
Downstream gene id
SNP gene ids105378531
Upstream gene distance
Downstream gene distance
SNP risk allelers705162-A
SNPsrs705162
Merged0
SNP id current705162
Contextintron_variant
Intergenic0
Allele frequency0.26
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.06
%95 Ci[1.04-1.09]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081