SNP Detail For rs7051085
1.Mapping Information
Human SNP ID rs7051085
Human chromosome chrX
Human SNP position 23356860
Pig chromosome chrX
Pig SNP position 20874399
2.Annotation Information
PubMed ID25897834
JournalTransl Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25897834
StudyThe International SSRI Pharmacogenomics Consortium (ISPC): a genome-wide association study of antidepressant treatment response.
Disease/TraitResponse to serotonin reuptake inhibitors in major depressive disorder
Initial sample298 European ancestry cases, 567 Asian ancestry cases, 1529 European and other ancestry cases
Replication sampleNA
RegionXp22.11
Chromosome idchrX
Chromosome position23356860
Reported genePTCHD1
Mapped genePTCHD1
Upstream gene id
Downstream gene id
SNP gene ids139411
Upstream gene distance
Downstream gene distance
SNP risk allelers7051085-?
SNPsrs7051085
Merged0
SNP id current7051085
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(Response)
Or beta1.59
%95 Ci[NR]
PlatformIllumina [~ 7000000] (imputed)
CNVN
Mapped traitunipolar depression, response to selective serotonin reuptake inhibitor
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0005658
Study accessionGCST002868