Human SNP ID | rs7037324 |
---|---|
Human chromosome | chr9 |
Human SNP position | 97896036 |
Pig chromosome | chr1 |
Pig SNP position | 267869863 |
PubMed ID | 25855579 |
---|---|
Journal | Int J Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/25855579 |
Study | Thyroid cancer GWAS identifies 10q26.12 and 6q14.1 as novel susceptibility loci and reveals genetic heterogeneity among populations. |
Disease/Trait | Thyroid cancer |
Initial sample | 398 European ancestry cases , 502 European ancestry controls |
Replication sample | 1,422 European ancestry cases, 1,908 European ancestry controls |
Region | 9q22.33 |
Chromosome id | chr9 |
Chromosome position | 97896036 |
Reported gene | FOXE1 |
Mapped gene | C9orf156 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51531 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7037324-A |
SNPs | rs7037324 |
Merged | 0 |
SNP id current | 7037324 |
Context | regulatory_region_variant |
Intergenic | 0 |
Allele frequency | 0.34 |
P value | 0.00000000000000001 |
Pvalue mlog | 17 |
P value text | |
Or beta | 1.54 |
%95 Ci | [1.39-1.70] |
Platform | Affymetrix [474624] |
CNV | N |
Mapped trait | thyroid carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0002892 |
Study accession | GCST002873 |