SNP Detail For rs7032871
1.Mapping Information
Human SNP ID rs7032871
Human chromosome chr9
Human SNP position 32422692
Pig chromosome chr10
Pig SNP position 38222812
2.Annotation Information
PubMed ID23382691
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23382691
StudyLoci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
Disease/TraitIgG glycosylation
Initial sample2,247 European ancestry individuals
Replication sampleNA
Region9p21.1
Chromosome idchr9
Chromosome position32422692
Reported geneNR
Mapped geneACO1
Upstream gene id
Downstream gene id
SNP gene ids48
Upstream gene distance
Downstream gene distance
SNP risk allelers7032871-T
SNPsrs7032871
Merged0
SNP id current7032871
Contextintron_variant
Intergenic0
Allele frequency0.278857772929653
P value0.000005
Pvalue mlog5.30102999566398
P value text(IGP27)
Or beta0.1579
%95 Ci[0.09-0.226] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitserum IgG glycosylation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005193
Study accessionGCST001848