Human SNP ID | rs7029536 |
---|---|
Human chromosome | chr9 |
Human SNP position | 127348132 |
Pig chromosome | chr1 |
Pig SNP position | 301805703 |
PubMed ID | 23319000 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/23319000 |
Study | Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. |
Disease/Trait | Metabolite levels (HVA) |
Initial sample | up to 398 European ancestry individuals |
Replication sample | NA |
Region | 9q33.3 |
Chromosome id | chr9 |
Chromosome position | 127348132 |
Reported gene | GARNL3, SLC2A8 |
Mapped gene | GARNL3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84253 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs7029536-T |
SNPs | rs7029536 |
Merged | 0 |
SNP id current | 7029536 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.2261 |
%95 Ci | unit decrease |
Platform | Illumina [5767231] (imputed) |
CNV | N |
Mapped trait | HVA measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005131 |
Study accession | GCST001824 |