SNP Detail For rs7029536
1.Mapping Information
Human SNP ID rs7029536
Human chromosome chr9
Human SNP position 127348132
Pig chromosome chr1
Pig SNP position 301805703
2.Annotation Information
PubMed ID23319000
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23319000
StudyGenome-wide association study of monoamine metabolite levels in human cerebrospinal fluid.
Disease/TraitMetabolite levels (HVA)
Initial sampleup to 398 European ancestry individuals
Replication sampleNA
Region9q33.3
Chromosome idchr9
Chromosome position127348132
Reported geneGARNL3, SLC2A8
Mapped geneGARNL3
Upstream gene id
Downstream gene id
SNP gene ids84253
Upstream gene distance
Downstream gene distance
SNP risk allelers7029536-T
SNPsrs7029536
Merged0
SNP id current7029536
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta0.2261
%95 Ciunit decrease
PlatformIllumina [5767231] (imputed)
CNVN
Mapped traitHVA measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005131
Study accessionGCST001824