SNP Detail For rs702634
1.Mapping Information
Human SNP ID rs702634
Human chromosome chr5
Human SNP position 53975590
Pig chromosome chr16
Pig SNP position 35227249
2.Annotation Information
PubMed ID24509480
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24509480
StudyGenome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
Disease/TraitType 2 diabetes
Initial sample12,171 European ancestry cases, 56,862 European ancestry controls, 6,952 East Asian ancestry cases, 11,865 East Asian ancestry controls, 5,561 South Asian ancestry cases, 14,458 South Asian ancestry controls, 1,804 Mexican ancestry cases, 779 Mexican ance
Replication sample21,491 European ancestry cases, 55,647 European ancestry controls
Region5q11.2
Chromosome idchr5
Chromosome position53975590
Reported geneARL15
Mapped geneARL15
Upstream gene id
Downstream gene id
SNP gene ids54622
Upstream gene distance
Downstream gene distance
SNP risk allelers702634-A
SNPsrs702634
Merged0
SNP id current702634
Contextintron_variant
Intergenic0
Allele frequency
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta1.06
%95 Ci[1.04-1.09]
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002352