Human SNP ID | rs7020996 |
---|---|
Human chromosome | chr9 |
Human SNP position | 22129580 |
Pig chromosome | chr1 |
Pig SNP position | 223795075 |
PubMed ID | 18372903 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18372903 |
Study | Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes. |
Disease/Trait | Type 2 diabetes |
Initial sample | 4,549 European ancestry cases, 5,579 European ancestry controls |
Replication sample | 24,194 European ancestry cases, 55,598 European ancestry controls |
Region | 9p21.3 |
Chromosome id | chr9 |
Chromosome position | 22129580 |
Reported gene | CDKN2A, CDKN2B |
Mapped gene | CDKN2B-AS1 - DMRTA1 |
Upstream gene id | 100048912 |
Downstream gene id | 63951 |
SNP gene ids | |
Upstream gene distance | 8483 |
Downstream gene distance | 317261 |
SNP risk allele | rs7020996-C |
SNPs | rs7020996 |
Merged | 0 |
SNP id current | 7020996 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.26 |
%95 Ci | [1.15-1.38] |
Platform | Affymetrix, Illumina [2202892] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST000167 |