SNP Detail For rs7020996
1.Mapping Information
Human SNP ID rs7020996
Human chromosome chr9
Human SNP position 22129580
Pig chromosome chr1
Pig SNP position 223795075
2.Annotation Information
PubMed ID18372903
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18372903
StudyMeta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
Disease/TraitType 2 diabetes
Initial sample4,549 European ancestry cases, 5,579 European ancestry controls
Replication sample24,194 European ancestry cases, 55,598 European ancestry controls
Region9p21.3
Chromosome idchr9
Chromosome position22129580
Reported geneCDKN2A, CDKN2B
Mapped geneCDKN2B-AS1 - DMRTA1
Upstream gene id100048912
Downstream gene id63951
SNP gene ids
Upstream gene distance8483
Downstream gene distance317261
SNP risk allelers7020996-C
SNPsrs7020996
Merged0
SNP id current7020996
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.26
%95 Ci[1.15-1.38]
PlatformAffymetrix, Illumina [2202892] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST000167