Human SNP ID | rs700752 |
---|---|
Human chromosome | chr7 |
Human SNP position | 46713955 |
Pig chromosome | chr18 |
Pig SNP position | 54324493 |
PubMed ID | 21216879 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21216879 |
Study | A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3. |
Disease/Trait | Insulin-like growth factors |
Initial sample | 10,280 European ancestry individuals |
Replication sample | NA |
Region | 7p12.3 |
Chromosome id | chr7 |
Chromosome position | 46713955 |
Reported gene | TNS3 |
Mapped gene | LOC730338 - LOC105375267 |
Upstream gene id | 730338 |
Downstream gene id | 105375267 |
SNP gene ids | |
Upstream gene distance | 16833 |
Downstream gene distance | 255737 |
SNP risk allele | rs700752-G |
SNPs | rs700752 |
Merged | 0 |
SNP id current | 700752 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.65 |
P value | 4E-21 |
Pvalue mlog | 20.397940008672 |
P value text | (IGFBP-3) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | IGFBP-3 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004626 |
Study accession | GCST000937 |
PubMed ID | 21216879 |
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21216879 |
Study | A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3. |
Disease/Trait | Insulin-like growth factors |
Initial sample | 10,280 European ancestry individuals |
Replication sample | NA |
Region | 7p12.3 |
Chromosome id | chr7 |
Chromosome position | 46713955 |
Reported gene | TNS3 |
Mapped gene | LOC730338 - LOC105375267 |
Upstream gene id | 730338 |
Downstream gene id | 105375267 |
SNP gene ids | |
Upstream gene distance | 16833 |
Downstream gene distance | 255737 |
SNP risk allele | rs700752-G |
SNPs | rs700752 |
Merged | 0 |
SNP id current | 700752 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.65 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | (IGF-I) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | IGF-1 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004627 |
Study accession | GCST000937 |