SNP Detail For rs7005380
1.Mapping Information
Human SNP ID rs7005380
Human chromosome chr8
Human SNP position 119941633
Pig chromosome chr4
Pig SNP position 20111117
2.Annotation Information
PubMed ID23583980
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583980
StudyGenome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis.
Disease/TraitInterstitial lung disease
Initial sample1,161 European ancestry cases, 4,683 European ancestry controls
Replication sample876 European ancestry cases, 1,890 European ancestry controls
Region8q24.12
Chromosome idchr8
Chromosome position119941633
Reported geneNR
Mapped geneDEPTOR
Upstream gene id
Downstream gene id
SNP gene ids64798
Upstream gene distance
Downstream gene distance
SNP risk allelers7005380-G
SNPsrs7005380
Merged0
SNP id current7005380
Contextintron_variant
Intergenic0
Allele frequency0.63
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.25
%95 Ci[1.15-1.37]
PlatformIllumina [439828]
CNVN
Mapped traitinterstitial lung disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004244
Study accessionGCST001968