SNP Detail For rs6993813
1.Mapping Information
Human SNP ID rs6993813
Human chromosome chr8
Human SNP position 119039999
Pig chromosome chr4
Pig SNP position 20842755
2.Annotation Information
PubMed ID18445777
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/18445777
StudyMultiple genetic loci for bone mineral density and fractures.
Disease/TraitBone mineral density (hip)
Initial sample5,861 European ancestry individuals
Replication sample7,925 European ancestry individuals
Region8q24.12
Chromosome idchr8
Chromosome position119039999
Reported geneOPG
Mapped geneCOLEC10
Upstream gene id
Downstream gene id
SNP gene ids10584
Upstream gene distance
Downstream gene distance
SNP risk allelers6993813-C
SNPsrs6993813
Merged0
SNP id current6993813
Contextintron_variant
Intergenic0
Allele frequency0.5
P value0.00000000003
Pvalue mlog10.5228787452803
P value text
Or beta0.09
%95 Ci[0.07-0.12] s.d. decrease
PlatformIllumina [301019]
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST000181