SNP Detail For rs6975557
1.Mapping Information
Human SNP ID rs6975557
Human chromosome chr7
Human SNP position 108332853
Pig chromosome chr9
Pig SNP position 118960193
2.Annotation Information
PubMed ID23593202
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23593202
StudyBivariate genome-wide association analyses identified genes with pleiotropic effects for femoral neck bone geometry and age at menarche.
Disease/TraitFemoral neck bone geometry and menarche (age at onset)
Initial sample1,728 European ancestry individuals
Replication sample501 European ancestry individuals, 826 Chinese ancestry individuals
Region7q31.1
Chromosome idchr7
Chromosome position108332853
Reported geneNRCAM
Mapped geneNRCAM
Upstream gene id
Downstream gene id
SNP gene ids4897
Upstream gene distance
Downstream gene distance
SNP risk allelers6975557-?
SNPsrs6975557
Merged0
SNP id current6975557
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000005
Pvalue mlog7.30102999566398
P value text(AAM-W, EA)
Or beta
%95 Ci
PlatformAffymetrix [760794]
CNVN
Mapped traitage at menopause
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004704
Study accessionGCST001950