Human SNP ID | rs6975557 |
---|---|
Human chromosome | chr7 |
Human SNP position | 108332853 |
Pig chromosome | chr9 |
Pig SNP position | 118960193 |
PubMed ID | 23593202 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23593202 |
Study | Bivariate genome-wide association analyses identified genes with pleiotropic effects for femoral neck bone geometry and age at menarche. |
Disease/Trait | Femoral neck bone geometry and menarche (age at onset) |
Initial sample | 1,728 European ancestry individuals |
Replication sample | 501 European ancestry individuals, 826 Chinese ancestry individuals |
Region | 7q31.1 |
Chromosome id | chr7 |
Chromosome position | 108332853 |
Reported gene | NRCAM |
Mapped gene | NRCAM |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4897 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6975557-? |
SNPs | rs6975557 |
Merged | 0 |
SNP id current | 6975557 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | (AAM-W, EA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [760794] |
CNV | N |
Mapped trait | age at menopause |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004704 |
Study accession | GCST001950 |