Human SNP ID | rs6972204 |
---|---|
Human chromosome | chr7 |
Human SNP position | 2542818 |
Pig chromosome | chr3 |
Pig SNP position | 2114173 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 7p22.3 |
Chromosome id | chr7 |
Chromosome position | 2542818 |
Reported gene | BRAT1 |
Mapped gene | BRAT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 221927 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6972204-G |
SNPs | rs6972204 |
Merged | 0 |
SNP id current | 6972204 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.171 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Bike energy expenditure ) |
Or beta | 0.03 |
%95 Ci | [NR] kcal/min increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | energy expenditure |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005109 |
Study accession | GCST001762 |