Human SNP ID | rs6971925 |
---|---|
Human chromosome | chr7 |
Human SNP position | 14406292 |
Pig chromosome | chr9 |
Pig SNP position | 92140046 |
PubMed ID | 19176441 |
---|---|
Journal | JAMA |
Link | www.ncbi.nlm.nih.gov/pubmed/19176441 |
Study | Genome-wide interrogation of germline genetic variation associated with treatment response in childhood acute lymphoblastic leukemia. |
Disease/Trait | Response to treatment for acute lymphoblastic leukemia |
Initial sample | 356 European ancestry cases, 53 Black cases, 78 cases |
Replication sample | NA |
Region | 7p21.2 |
Chromosome id | chr7 |
Chromosome position | 14406292 |
Reported gene | DGKB |
Mapped gene | DGKB |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1607 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6971925-T |
SNPs | rs6971925 |
Merged | 0 |
SNP id current | 6971925 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 13.91 |
%95 Ci | [2.72-70.92] |
Platform | Affymetrix [476796] |
CNV | N |
Mapped trait | acute lymphoblastic leukemia, response to antineoplastic agent |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000220, http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST000323 |