Human SNP ID | rs6971109 |
---|---|
Human chromosome | chr7 |
Human SNP position | 21183171 |
Pig chromosome | chr12 |
Pig SNP position | 33363838 |
PubMed ID | 22864933 |
---|---|
Journal | Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/22864933 |
Study | Identification of novel germline polymorphisms governing capecitabine sensitivity. |
Disease/Trait | Capecitabine sensitivity |
Initial sample | Up to 84 East Asian ancestry lymphoblastoid cell lines, up to 164 European ancestry lymphoblastoid cell lines, up to 173 African ancestry lymphoblastoid cell lines, up to 82 African American lymphoblastoid cell lines |
Replication sample | NA |
Region | 7p15.3 |
Chromosome id | chr7 |
Chromosome position | 21183171 |
Reported gene | intergenic |
Mapped gene | LINC01162 - ASS1P11 |
Upstream gene id | 104355138 |
Downstream gene id | 340274 |
SNP gene ids | |
Upstream gene distance | 160023 |
Downstream gene distance | 36807 |
SNP risk allele | rs6971109-? |
SNPs | rs6971109 |
Merged | 0 |
SNP id current | 6971109 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | |
%95 Ci | |
Platform | NR [~ 2000000] |
CNV | N |
Mapped trait | response to antineoplastic agent |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST001368 |