Human SNP ID | rs6967385 |
---|---|
Human chromosome | chr7 |
Human SNP position | 12351693 |
Pig chromosome | chr9 |
Pig SNP position | 90101527 |
PubMed ID | 23006423 |
---|---|
Journal | BMC Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/23006423 |
Study | Genetic association with overall survival of taxane-treated lung cancer patients - A genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study. |
Disease/Trait | Response to taxane treatment (placlitaxel) |
Initial sample | 96 African American lymphoblastoid cell lines, 96 European ancestry lymphoblastoid cell lines, 96 Han Chinese ancestry lymphoblastoid cell lines |
Replication sample | NA |
Region | 7p21.3 |
Chromosome id | chr7 |
Chromosome position | 12351693 |
Reported gene | TMEM106B |
Mapped gene | VWDE |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 221806 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6967385-? |
SNPs | rs6967385 |
Merged | 0 |
SNP id current | 6967385 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 1300000] |
CNV | N |
Mapped trait | response to paclitaxel |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_1901555 |
Study accession | GCST001694 |