Human SNP ID | rs6960319 |
---|---|
Human chromosome | chr7 |
Human SNP position | 147561539 |
Pig chromosome | chr9 |
Pig SNP position | 121486145 |
PubMed ID | 25760438 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25760438 |
Study | First genome-wide association study in an Australian aboriginal population provides insights into genetic risk factors for body mass index and type 2 diabetes. |
Disease/Trait | Body mass index |
Initial sample | 361 Martu Australian Aboriginal ancestry individuals |
Replication sample | NA |
Region | 7q35 |
Chromosome id | chr7 |
Chromosome position | 147561539 |
Reported gene | CNTNAP2 |
Mapped gene | CNTNAP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 26047 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6960319-? |
SNPs | rs6960319 |
Merged | 0 |
SNP id current | 6960319 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.36 |
%95 Ci | [0.18-0.54] unit decrease |
Platform | Illumina [1075436] (imputed) |
CNV | N |
Mapped trait | longitudinal BMI measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005937 |
Study accession | GCST002805 |