Human SNP ID | rs6956675 |
---|---|
Human chromosome | chr7 |
Human SNP position | 63117392 |
Pig chromosome | chr3 |
Pig SNP position | 17317339 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 7q11.21 |
Chromosome id | chr7 |
Chromosome position | 63117392 |
Reported gene | LOC442318 |
Mapped gene | SAPCD2P4 - ZNF733P |
Upstream gene id | 442318 |
Downstream gene id | 643955 |
SNP gene ids | |
Upstream gene distance | 2510 |
Downstream gene distance | 173895 |
SNP risk allele | rs6956675-A |
SNPs | rs6956675 |
Merged | 0 |
SNP id current | 6956675 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.135 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (CRP ) |
Or beta | 0.03 |
%95 Ci | [NR] ng/mL increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST001762 |