SNP Detail For rs6956675
1.Mapping Information
Human SNP ID rs6956675
Human chromosome chr7
Human SNP position 63117392
Pig chromosome chr3
Pig SNP position 17317339
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region7q11.21
Chromosome idchr7
Chromosome position63117392
Reported geneLOC442318
Mapped geneSAPCD2P4 - ZNF733P
Upstream gene id442318
Downstream gene id643955
SNP gene ids
Upstream gene distance2510
Downstream gene distance173895
SNP risk allelers6956675-A
SNPsrs6956675
Merged0
SNP id current6956675
Contextupstream_gene_variant
Intergenic1
Allele frequency0.135
P value0.000006
Pvalue mlog5.22184874961635
P value text(CRP )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST001762