Human SNP ID | rs6952407 |
---|---|
Human chromosome | chr7 |
Human SNP position | 66580525 |
Pig chromosome | chr3 |
Pig SNP position | 16607915 |
PubMed ID | 25293881 |
---|---|
Journal | Cancer Epidemiol Biomarkers Prev |
Link | www.ncbi.nlm.nih.gov/pubmed/25293881 |
Study | The Contribution of Common Genetic Variation to Nicotine and Cotinine Glucuronidation in Multiple Ethnic/Racial Populations. |
Disease/Trait | Cotinine glucuronidation |
Initial sample | 437 European ancestry current smoker individuals, 364 African American current smoker individuals, 453 Latino current smoker individuals, 674 Japanese ancestry current smoker individuals, 311 Native Hawaiian ancestry current smoker individuals |
Replication sample | NA |
Region | 7q11.21 |
Chromosome id | chr7 |
Chromosome position | 66580525 |
Reported gene | LOC493754, KCTD7 |
Mapped gene | LOC493754 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 493754 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6952407-A |
SNPs | rs6952407 |
Merged | 0 |
SNP id current | 6952407 |
Context | upstream_gene_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | 0.033 |
%95 Ci | [NR] unit increase |
Platform | Illumina [11892802] (imputed) |
CNV | N |
Mapped trait | cotinine glucuronidation measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006508 |
Study accession | GCST002652 |