SNP Detail For rs6948404
1.Mapping Information
Human SNP ID rs6948404
Human chromosome chr7
Human SNP position 36570887
Pig chromosome chr18
Pig SNP position 41196600
2.Annotation Information
PubMed ID20205591
JournalJ Infect Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/20205591
StudyHost determinants of HIV-1 control in African Americans.
Disease/TraitHIV-1 viral setpoint
Initial sample515 African American cases
Replication sampleNA
Region7p14.2
Chromosome idchr7
Chromosome position36570887
Reported geneAOAH
Mapped geneAOAH
Upstream gene id
Downstream gene id
SNP gene ids313
Upstream gene distance
Downstream gene distance
SNP risk allelers6948404-?
SNPsrs6948404
Merged0
SNP id current6948404
Contextintron_variant
Intergenic0
Allele frequency0.07
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [1212217]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000656