Human SNP ID | rs6946494 |
---|---|
Human chromosome | chr7 |
Human SNP position | 135803873 |
Pig chromosome | chr18 |
Pig SNP position | 14248031 |
PubMed ID | 22589738 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22589738 |
Study | Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. |
Disease/Trait | Visceral adipose tissue adjusted for BMI |
Initial sample | 5,560 European ancestry female individuals, 4,997 European ancestry male individuals |
Replication sample | NA |
Region | 7q33 |
Chromosome id | chr7 |
Chromosome position | 135803873 |
Reported gene | UNQ194 |
Mapped gene | LOC101928915 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101928915 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6946494-A |
SNPs | rs6946494 |
Merged | 0 |
SNP id current | 6946494 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.83 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (women) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [2500000] (imputed) |
CNV | N |
Mapped trait | visceral adipose tissue measurement, body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004765, http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001523 |