SNP Detail For rs6946494
1.Mapping Information
Human SNP ID rs6946494
Human chromosome chr7
Human SNP position 135803873
Pig chromosome chr18
Pig SNP position 14248031
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue adjusted for BMI
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region7q33
Chromosome idchr7
Chromosome position135803873
Reported geneUNQ194
Mapped geneLOC101928915
Upstream gene id
Downstream gene id
SNP gene ids101928915
Upstream gene distance
Downstream gene distance
SNP risk allelers6946494-A
SNPsrs6946494
Merged0
SNP id current6946494
Contextintergenic_variant
Intergenic0
Allele frequency0.83
P value0.000008
Pvalue mlog5.09691001300805
P value text(women)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral adipose tissue measurement, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004765, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001523